spateo

Spatiotemporal modeling of spatial transcriptomics

Subpackages

• spateo.alignment
• spateo.digitization
• spateo.external
• spateo.io
• spateo.plotting
• spateo.preprocessing
• spateo.segmentation
• spateo.svg
• spateo.tdr
• spateo.tools

Submodules

• spateo.align
• spateo.configuration
• spateo.cs
• spateo.data_io
• spateo.dd
• spateo.errors
• spateo.get_version
• spateo.logging
• spateo.pl
• spateo.pp
• spateo.sample_data
• spateo.tl
• spateo.utils
• spateo.warnings

Attributes

__version__
config

Functions

get_version(→ str)

Get the version of a package or module

Package Contents

spateo.get_version(package: pathlib.Path | str) → str

Get the version of a package or module Pass a module path or package name. The former is recommended, since it also works for not yet installed packages. Supports getting the version from #. The directory name (as created by setup.py sdist) #. The output of git describe #. The package metadata of an installed package

(This is the only possibility when passing a name)

Parameters:

package

package name or module path (…/module.py or …/module/__init__.py)

spateo.__version__

spateo.config